Where can I find the dipoli command-line executable?
The Boundary Element Method (BEM) allows for source reconstruction of EEG data with realistic head geometries. FieldTrip implements the BEM method for EEG in a general fashion in the forward “leadfield_computation” function. However, this requires that a previously prepared BEM model is passed to the “sourceanalysis” function or to the “dipolefitting” function. To construct such an EEG BEM model, you can use the “prepare_bemmodel” function, where in cfg.method you should specify dipoli or bemcp.
Dipoli is a command line application that was developped by Thom Oostendorp. You can download the Linux version version from ftp://ftp.fieldtriptoolbox.org/pub/fieldtrip/external/. You should unzip it and copy it to fieldtrip/external/dipoli. Note that there is no windows version available. The dipoli-executable for Linux was compiled on a 32bit system. In order to run it on a 64bit system, you need to install the “ia32-libs” library (sudo apt-get install ia32-libs). On newer systems, ia32-libs are deprecated so you should enable the i386 architecture (sudo dpkg –add-architecture i386 && sudo apt-get update) and install the 32-bit libraries (sudo apt-get install libc6:i386 libstdc++6:i386).
BEMCP is a MATLAB toolbox for BEM modeling, developed by Christophe Phillips from the Universite Liege in Belgium. It is available from ftp://ftp.fieldtriptoolbox.org/pub/fieldtrip/external/ and should be installed under the directory fieldtrip/external/bemcp.