Note that this reference documentation is identical to the help that is displayed in MATLAB when you type “help ft_mvaranalysis”.
FT_MVARANALYSIS performs multivariate autoregressive modeling on time series data over multiple trials. Use as [mvardata] = ft_mvaranalysis(cfg, data) The input data should be organised in a structure as obtained from the FT_PREPROCESSING function. The configuration depends on the type of computation that you want to perform. The output is a data structure of datatype 'mvar' which contains the multivariate autoregressive coefficients in the field coeffs, and the covariance of the residuals in the field noisecov. The configuration should contain: cfg.toolbox = the name of the toolbox containing the function for the actual computation of the ar-coefficients this can be 'biosig' (default) or 'bsmart' you should have a copy of the specified toolbox in order to use mvaranalysis (both can be downloaded directly). cfg.mvarmethod = scalar (only required when cfg.toolbox = 'biosig'). default is 2, relates to the algorithm used for the computation of the AR-coefficients by mvar.m cfg.order = scalar, order of the autoregressive model (default=10) cfg.channel = 'all' (default) or list of channels for which an mvar model is fitted. (Do NOT specify if cfg.channelcmb is defined) cfg.channelcmb = specify channel combinations as a two-column cell array with channels in each column between which a bivariate model will be fit (overrides cfg.channel) cfg.keeptrials = 'no' (default) or 'yes' specifies whether the coefficients are estimated for each trial seperately, or on the concatenated data cfg.jackknife = 'no' (default) or 'yes' specifies whether the coefficients are estimated for all leave-one-out sets of trials cfg.zscore = 'no' (default) or 'yes' specifies whether the channel data are z-transformed prior to the model fit. This may be necessary if the magnitude of the signals is very different e.g. when fitting a model to combined MEG/EMG data cfg.demean = 'yes' (default) or 'no' explicit removal of DC-offset cfg.ems = 'no' (default) or 'yes' explicit removal ensemble mean ft_mvaranalysis can be used to obtain one set of coefficients across all time points in the data, also when the trials are of varying length. ft_mvaranalysis can be also used to obtain time-dependent sets of coefficients based on a sliding window. In this case the input cfg should contain: cfg.t_ftimwin = the width of the sliding window on which the coefficients are estimated cfg.toi = [t1 t2 ... tx] the time points at which the windows are centered To facilitate data-handling and distributed computing you can use cfg.inputfile = ... cfg.outputfile = ... If you specify one of these (or both) the input data will be read from a *.mat file on disk and/or the output data will be written to a *.mat file. These mat files should contain only a single variable, corresponding with the input/output structure. See also FT_PREPROCESSING, FT_SOURCESTATISTICS, FT_FREQSTATISTICS, FT_TIMELOCKSTATISTICS