FieldTrip workshop in Oslo
Where
RITMO Centre for Interdisciplinary Studies in Rhythm, Time and Motion
Forskningsveien 3A
0373 Oslo
Norway
Place of workshop
Room 3417 Terminalstue Assembler
Ole-Johan Dahls hus
Address: Gaustadalléen 23B.
When
Wednesday June 12th - Friday June 14th 2019
Who
The RITMO Centre is the local organizer. Sabine Leske and Alejandro Omar Blenkmann are in charge of the local organization.
Lau Møller Andersen (Karolinska Institute, Stockholm) and Britta Westner (CFIN, Aarhus University) are the lecturers.
There will be room for ~30 participants. RITMO centre employees and students have priority. When the local organizers have assessed how many RITMO affiliates are attending, the workshop will be open to external participants if there are still places left.
Links to lectures
N.B.! Note that links to lectures are not up yet, but will before the summer break is over.
Tentative Program
Wednesday, June 12th
- 07.30-08.00 Registration, handouts and coffee
- 08.00-09.00 Introduction to MATLAB and the FieldTrip toolbox] (Lecture)
- 09.00-09.15 Coffee break
- 09.15-10.45 Getting started with EEG data, quality checks, cleaning of data and Event-Related Potentials (Hands-on)
- 10.45-11.00 Coffee break
- 11.00-12.00 Frequency and Time-Frequency analysis (Lecture)
- 12.00-13.15 Lunch
- 13.15.13.45 Questions and Answers so far
- 13.45-15.15 Time-Frequency analysis of EEG data (Hands-on)
- 15.15-15.30 Coffee break
- 15.30-16.00 Wrap-up of the day and questions
- 16.00-17.30 Playground ??
Thursday, June 13th
- 08.00-09.15 Cluster-based statistical testing (Lecture)
- 09.15-09.30 Coffee Break
- 09.30-11.00 Cluster-based statistical (Hands-on)
- 11.15-12.15 Source reconstruction using beamformers (Lecture)
- 12.15-13.15 Lunch
- 13.15-15.15 Localizing oscillatory sources (Hands-on)
- 15.15-15.30 Coffee break
- 15.30-16.00 Wrap-up of the day and questions
- 16.00-17.30 Playground ??
Friday, June 14th
- 08.00-09.15 Forward modeling (Lecture)
- 09.00-09.15 Coffee break
- 09.15-11.00 Forward modeling (Hands-on)
- 11.00-11.15 Coffee break
- 11.15-12.15 Wrap-up of everything so far
- 12.15-13.15 Lunch
- 13.15-14.15 Machine learning applied to EEG data (Lecture)
- 14.15-14.30 Coffee break
- 14.30-16.00 Playground
- 16.00-17.30 Playground ??
- 18.00-23.59 Party
The data used for the hands-on sessions
During the hands-on sessions we will use a task EEG dataset recorded in a auditory oddball experiment.
You can download the data from our download server. The data can also be provided on a USB stick during the hands-on sessions.
Installing FieldTrip and setting up MATLAB
For the hands-on sessions you have to start MATLAB. To ensure that everything runs smooth, we will work with a clean version of FieldTrip from the download server.
- Download all the files, please keep the same directory structure (i.e. split over hands-on sessions)
- Unzip
fieldtrip.zipfile to the folder where you usually keep your MATLAB packages - Unzip
dicom.zipinto a folder called dicom, which should be in the same directory where you keep the other data files (from step 1)
Please do NOT use the graphical path management tool from MATLAB. In this hands-on session we’ll manage the path from the command line, but in general you are much better off using a startup.m file than the path GUI.
Please do NOT add FieldTrip with all subdirectories, subdirectories will be added automatically when needed, but only when needed.